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An Interdisciplinary Research Centre at the University of Cambridge


Key publications: 

Kemp, S. A., Collier, D. A., Datir, R. P., Ferreira, I. A. T. M., Gayed, S., Jahun, A., et al. (2021). SARS-CoV-2 evolution during treatment of chronic infection. Nature, 1–26.

Lumby, C. K., Zhao, L., Breuer, J., & Illingworth, C. J. (2020). A large effective population size for established within-host influenza virus infection. eLife, 9, 217–17.

Illingworth, C. J., Raghwani, J., Serwadda, D., Sewankambo, N. K., Robb, M. L., Eller, M. A., et al. (2020). A de novo approach to inferring within-host fitness effects during untreated HIV-1 infection. PLoS Pathogens, 16(6), e1008171–26.

Lumby, C. K., Nené, N. R., & Illingworth, C. J. (2018). A novel framework for inferring parameters of transmission from viral sequence data. PLoS Genetics, 14(10), e1007718.

Sobel Leonard, A., McClain, M. T., Smith, G. J. D., Wentworth, D. E., Halpin, R. A., Lin, X., et al. (2017). The effective rate of influenza reassortment is limited during human infection. PLoS Pathogens, 13(2), e1006203–26.

Viral evolution and transmission
 Chris   Illingworth
Not available for consultancy


Person keywords: 
Pathogen Evolution